转录组和代谢组学联合分析小管福寿螺温度胁迫响应机制
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作者单位:

1.南京师范大学生命科学学院 南京 210023;2.南京林业大学生命科学学院 南京 210037

作者简介:

储海燕,女,硕士研究生;研究方向:分子生态学;E-mail:chuhaiyan0222@163.com。

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基金项目:

国家自然科学基金项目(No. 32170434),2024年江苏省研究生科研与实践创新计划项目(No. SJCX24_0633);


Integrated Transcriptomic and Metabolomic Responses in the Hepatopancreas of an Invasive Apple Snail Under Temperature Stress
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Affiliation:

1.College of Life Sciences, Nanjing Normal University, Nanjing 210023; 2.College of Life Sciences, Nanjing Forestry University, Nanjing 210037, China

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    摘要:

    温度是影响水生生物生长、发育和新陈代谢的重要因素。对环境温度的耐受性是影响小管福寿螺(Pomacea canaliculata)分布和扩散的重要因子。为探究温度胁迫下小管福寿螺的响应调控机制,本研究采用转录组学和代谢组学联合分析小管福寿螺肝胰腺组织在高温(36 ℃)和低温(10 ℃)胁迫48 h后,基因表达情况以及代谢产物的变化。与对照组(25 ℃)相比,高温胁迫下共获得446个差异表达基因和233种差异代谢物;低温胁迫下筛选出288个差异表达基因和119种差异代谢物。高温组差异表达基因和代谢物在氨基酸、脂质运输和免疫系统通路中上调,在脂肪酸代谢和细胞色素P450通路中下调。在低温胁迫下,丙氨酸、天冬氨酸、谷氨酸、富马酸和α-酮戊二酸发生显著变化,可能影响三羧酸循环的能量产生。此外,还有一些基因显著富集在药物代谢和热休克蛋白等相关通路中,以减轻温度胁迫对小管福寿螺生理过程的影响。随机选取6个基因进行荧光定量PCR验证,基因表达趋势与转录组结果一致。综上所述,急性温度胁迫会引起小管福寿螺肝胰腺的免疫应激和能量代谢等过程,小管福寿螺通过调控氨基酸代谢及增加不饱和脂肪酸的含量等使自身快速适应环境温度变化。

    Abstract:

    [Objectives] Temperature is an important factor that affects the growth, development, and metabolism of aquatic organisms. Temperature tolerance significantly affects the survival and expansion of the invasive Apple Snail Pomacea canaliculata. [Methods] Transcriptome sequencing and metabolomic analysis were used to examine the alterations in the hepatopancreas of P. canaliculata exposed to high (36 ℃) and low (10 ℃) temperature stress for 48 h. After cleaning the raw sequencing data, we identified differentially expressed genes by |log2FoldChange| > 1 and P < 0.05. Gene ontology (GO) annotation and pathway enrichment analysis were then performed on the differentially expressed genes. Significantly changed metabolites were identified by variable important in projection > 1, P < 0.05, and |log2FoldChange| > 1.5. Kyoto encyclopedia of genes and genomes (KEGG) was used to search for the metabolic pathways of significantly changed metabolites. The Pearson correlation coefficient was used to analyze the correlation between differentially expressed genes and significantly changed metabolites. [Results] Compared to the control group, the high-temperature group had 446 genes and 233 metabolites with differential expression, while the low-temperature group had 288 genes and 119 metabolites exhibiting differential expression. The majority of genes and metabolites were upregulated in pathways related to amino acids, lipid transport, and immune system processes (Fig. 1), while they were downregulated in lipid acid and cytochrome P450 pathways during high-temperature stress (Fig. 2). Under low-temperature stress, significant changes were observed in alanine, aspartate, glutamate, fumaric acid, and alpha-ketoglutaric acid (Figs. 3, 4), which are involved in the energy production of the TCA cycle. Furthermore, several genes enriched in the drug metabolism pathway and heat shock proteins were found to mitigate the effects on their physiological processes. Finally, the expression patterns of these differentially expressed genes in the quantitative real-time PCR analyses were similar to those obtained by RNA-seq, indicating the accuracy and reliability of the RNA-Seq results (Fig. 6). [Conclusion] Acute temperature stress can induce immune stress and energy metabolism processes in the hepatopancreas of P. canaliculata. P. canaliculata rapidly adapts to environmental temperature changes by regulating amino acid metabolism and increasing the content of unsaturated fatty acids.

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储海燕,杨海韵,常婷婷,沈雯佳,井木子,林友福,宁阔,李宏,陈炼.2025.转录组和代谢组学联合分析小管福寿螺温度胁迫响应机制.动物学杂志,60(1):45-58.

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  • 收稿日期:2024-06-03
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  • 在线发布日期: 2025-03-04
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